BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G07LP1|AL430283
(938 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 1000 0.0
>3x_Contig1349
Length = 5890
Score = 1000 bits (504), Expect = 0.0
Identities = 511/512 (99%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 1 gatctccaagaaacgcagcgttagaaatgctagccaaggatgctaccggagcgaacaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gatctccaagaaacgcagcgttagaaatgctagccaaggatgctaccggagcgaacaaca 480
Query: 61 acatcgcgcaacccgaatttttcgatgacagcttctttttcagtggtaatctaatataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 acatcgcgcaacccgaatttttcgatgacagcttctttttcagtggtaatctaatataca 420
Query: 121 actctgagttactcgaagaaaaaaacaacatcaccacgtcatgtgcccaaattgctcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 actctgagttactcgaagaaaaaaacaacatcaccacgtcatgtgcccaaattgctcctc 360
Query: 181 gtaccatgaaagcaatttcttctaacgaattcaacatgaatccaaactctcattcgctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtaccatgaaagcaatttcttctaacgaattcaacatgaatccaaactctcattcgctca 300
Query: 241 tgcaatgggacgatatcccatatttcatgactacaaatctaaacccagatacaaatacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgcaatgggacgatatcccatatttcatgactacaaatctaaacccagatacaaatacaa 240
Query: 301 acacctcgccccaaatgtcagatacccaggacaccatgagaattaataacaacaacaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 acacctcgccccaaatgtcagatacccaggacaccatgagaattaataacaacaacaaca 180
Query: 361 acaacaacaacaacataccccaggcattgccatcattatcgtcatcctcatcgtacatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 acaacaacaacaacataccccaggcattgccatcattatcgtcatcctcatcgtacatgg 120
Query: 421 agactgaaatcaaggcaatctacaaacaagtacaagattacatagtcctcctcgatagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 agactgaaatcaaggcaatctacaaacaagtacaagattacatagtcctcctcgatagta 60
Query: 481 ccgacc-acgagctggaattcgtcgccagcgg 511
|||||| |||||||||||||||||||||||||
Sbjct: 59 ccgaccaacgagctggaattcgtcgccagcgg 28
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7682
Number of Sequences: 1807
Number of extensions: 7682
Number of successful extensions: 695
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)